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ChemistryOC

Biomolecules

Build conceptual understanding of Biomolecules. Focus on definitions, mechanisms, and core principles.

2-3 Qs/year45 minPhase 3 · FOUNDATION

Concept Core

Biomolecules — carbohydrates, proteins, vitamins, and nucleic acids — form the chemical basis of life. NEET focuses on classification, structural features, and disease associations.

Carbohydrates are classified as monosaccharides (glucose C6H12O6, fructose C6H12O6), disaccharides (sucrose, lactose, maltose), and polysaccharides (starch, cellulose, glycogen).
Glucose () is an aldohexose (aldehyde + 6 carbons); fructose is a ketohexose (ketone + 6 carbons). In cyclic form, glucose adopts a pyranose ring (6-membered) with two anomers: α\alpha-D-glucose (C1-OH axial/down in Haworth) and β\beta-D-glucose (C1-OH equatorial/up). Mutarotation is the interconversion between α\alpha and β\beta forms through the open-chain intermediate.

Reducing vs Non-Reducing Sugars: Reducing sugars have a free anomeric carbon (hemiacetal/hemiketal that can open to expose a free aldehyde/ketone), giving positive Tollens' and Fehling's tests. Glucose, fructose, lactose, and maltose are all reducing sugars. Sucrose is the key non-reducing sugar: its glycosidic bond links the anomeric carbon of BOTH glucose (C1) and fructose (C2), leaving NO free anomeric carbon. Lactose (glucose + galactose, β\beta-1,4 linkage) and maltose (glucose + glucose, α\alpha-1,4 linkage) are reducing because one anomeric carbon remains free.

Polysaccharides: starch contains amylose (linear, α\alpha-1,4 linkages) and amylopectin (branched, α\alpha-1,4 + α\alpha-1,6 at branch points). Cellulose has β\beta-1,4 linkages (humans cannot digest — we lack the enzyme to cleave β\beta linkages). Glycogen (animal starch) is highly branched like amylopectin.

Proteins: Amino acids have the general structure H2N-CHR-COOH ( for glycine). At the isoelectric point, amino acids exist as zwitterions (+H3N-CHR-COO-). The peptide bond (-CO-NH-) forms by condensation between -COOH and -NH2 with loss of H2O. Protein structure hierarchy: primary (amino acid sequence, peptide bonds), secondary (α\alpha-helix — intramolecular H-bonding between C=O and N-H of every 4th residue; β\beta-pleated sheet — intermolecular H-bonding between adjacent chains), tertiary (overall 3D fold — disulfide bonds, hydrophobic interactions, ionic bonds), quaternary (multiple polypeptide subunits — hemoglobin has 4 subunits). Denaturation disrupts secondary/tertiary/quaternary structures by heat, pH change, or chemicals, but does NOT break peptide bonds (primary structure is preserved).

Vitamins: Water-soluble: B-complex (B1-thiamine/beriberi, B2-riboflavin/cheilosis, B3-niacin/pellagra, B6-pyridoxine/convulsions, B7-biotin, B9-folic acid/megaloblastic anemia, B12-cyanocobalamin/pernicious anemia) and C (ascorbic acid/scurvy). Fat-soluble: A (retinol/night blindness, xerophthalmia), D (calciferol/rickets in children, osteomalacia in adults), E (tocopherol/infertility), K (phylloquinone/delayed blood clotting).

Nucleic Acids: DNA is a double helix with complementary base pairing: A-T (2 hydrogen bonds) and G-C (3 hydrogen bonds). More G-C content = higher melting temperature. DNA uses deoxyribose sugar; RNA uses ribose sugar and replaces thymine with uracil. Three RNA types: mRNA (carries genetic code from DNA to ribosome), tRNA (cloverleaf structure, transfers amino acids to ribosome), rRNA (structural component of ribosomes).

The key testable concept is that sucrose is non-reducing because both anomeric carbons are involved in the glycosidic bond, and that G-C base pairs have 3 hydrogen bonds (not 2) while A-T has 2.

Key Testable Concept

The key testable concept is that sucrose is non-reducing because both anomeric carbons are involved in the glycosidic bond, and that G-C base pairs have 3 hydrogen bonds (not 2) while A-T has 2.

Comparison Tables

A) Disaccharides

SugarComponentsLinkageReducing/Non-reducingReason
SucroseGlucose + Fructoseα\alpha-1,2 (C1 of glucose + C2 of fructose)Non-reducingBoth anomeric C involved in bond
LactoseGlucose + Galactoseβ\beta-1,4ReducingFree anomeric C on glucose unit
MaltoseGlucose + Glucoseα\alpha-1,4ReducingFree anomeric C on second glucose

B) Vitamins

VitaminChemical NameSolubilityDeficiency Disease
ARetinolFat-solubleNight blindness, xerophthalmia
B1ThiamineWater-solubleBeriberi
B2RiboflavinWater-solubleCheilosis
B3NiacinWater-solublePellagra
B6PyridoxineWater-solubleConvulsions
B9Folic acidWater-solubleMegaloblastic anemia
B12CyanocobalaminWater-solublePernicious anemia
CAscorbic acidWater-solubleScurvy
DCalciferolFat-solubleRickets (children), osteomalacia (adults)
ETocopherolFat-solubleInfertility
KPhylloquinoneFat-solubleDelayed blood clotting

C) Protein Structure Levels

LevelFeaturesBonds/ForcesExample
PrimaryAmino acid sequencePeptide bonds (covalent -CO-NH-)Insulin
Secondaryα\alpha-helix, β\beta-sheetHydrogen bonds (intramolecular or intermolecular)Keratin (α\alpha-helix)
TertiaryOverall 3D foldDisulfide bonds, hydrophobic, ionic, H-bondsMyoglobin
QuaternaryMultiple subunitsSame as tertiary (between subunits)Hemoglobin (4 subunits)

D) DNA vs RNA

FeatureDNARNA
StrandsDouble-stranded (helix)Mostly single-stranded
SugarDeoxyribose (2'-H)Ribose (2'-OH)
BasesA, T, G, CA, U, G, C
Base pairingA-T (2 H-bonds), G-C (3 H-bonds)A-U in secondary structures
FunctionGenetic information storageProtein synthesis (mRNA, tRNA, rRNA)
LocationNucleus (mainly)Nucleus and cytoplasm

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